The game contains the plots of the first three Inazuma Eleven games, starting off by following the protagonist of the three games, Endou Mamoru, a second year student at Raimon. He has dreams of competing in the Football Frontier, but with an unenthused Soccer club and the looming threat of the club being closed due to inactivity, his chances are looking dim. That is, until he plays a match against the intimidating Teikoku Gakuen, a match which changes the Raimon Soccer Club forever.