The Egg Fleet was first employed in its early development during the fight between Mammoth Mogul, Ixis Naugus, the Destructix and the Arachne verses the Knothole Freedom Fighters and the Chaotix. Dr. Eggman had the Egg Fleet arrive on the scene after both parties were battle-weary, using it to capture and imprison Naugus, the Arachne, Mogul and the Destructix in the Egg Grape Chambers, leaving Sonic and the Freedom Fighters to witness the capabilities of the Egg Fleet. Later on, The Egg Fleet would be used to obliterate A.D.A.M., who was inhabiting Tommy Turtle's body. (StH: #164, #169)